Home
Home
Search (⌘K or ⌃K)
Data
Methodology
Data Model
About
Help
Sign In
INDEXED
Home
/
SequenceFile
/
IGVFFI9080RCHI
IGVFFI9080RCHI
released
validated
Json view
File Set
IGVFDS5083GBBF
(single-cell ATAC-seq (SHARE-seq))
Summary
R2 reads from sequencing run 5363
File Format
fastq
Content Type
reads
Aliases
buenrostro-bernstein:SS-LS_5363_R2
md5sum
c46a5bf97c2d571c81c79891ed594910
Content MD5sum
a482e18300490401f851b8bcfa3ad1f6
File Size
8.6 GB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-1578_L1_SS-PKR-436_2022-APRIL-R1-SET-OF-192_R2.fastq.gz
Checkfiles Version
v17
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
5363
Flowcell ID
22KHF5LT3
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
R2
Average Read Length
199
Read Count
135812876
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM4321WQTD
Tissue
brain
Mus musculus C57BL/6 brain tissue (cellular sub pool: SS-PKR 436)
Associated seqspec Files
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI4488MOJS
yaml
seqspec
seqspec of IGVFFI6465SWTP, IGVFFI9080RCHI
Jason Buenrostro, Broad
1.3 KB
validated