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INDEXED
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SequenceFile
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IGVFFI9066CRFG
IGVFFI9066CRFG
released
validated
Json view
File Set
IGVFDS9445YYVB
(Parse SPLiT-seq)
Summary
reads from sequencing run 7
File Format
fastq
Content Type
reads
md5sum
2219bd047e6e948e5d6d3f14761406ea
Content MD5sum
ae888a95b1eec9dee59a7df4b4073eec
File Size
4.1 GB
Submitted File Name
igvf_b01/nanopore/igvfb01_13H_lig-ss_7.fastq.gz
Sequencing Details
Sequencing Platform
ONT GridION X5
Sequencing Run
7
Sequencing Kit
ONT Ligation Sequencing Kit V14
Average Read Length
821
Read Count
5480136
Samples
1 item
Accession
Type
Sample Terms
Disease Terms
Summary
IGVFSM2294BOOU
MultiplexedSample
left cerebral cortex
multiplexed sample: left cerebral cortex tissue, female, Mus musculus CASTJ (72 days); left cerebral cortex tissue, male, Mus musculus B6J (72 days); ... and 6 more samples
Files This File Derives From
1 item
Accession
File Set
File Format
Content Type
Lab
File Size
Upload Status
IGVFFI5646MVPY
IGVFDS9445YYVB
pod5
Nanopore reads
Ali Mortazavi, UCI
62 GB
validated
Attribution
Award
HG012077
Principal Investigator(s)
Lior Pachter
,
Kim Green
,
Grant MacGregor
,
Ali Mortazavi
,
Barbara Wold
Contact P.I.
Ali Mortazavi
Lab
Ali Mortazavi, UCI