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SequenceFile
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IGVFFI9015HPLR
IGVFFI9015HPLR
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This object is in preview status. Metadata is subject to change until this object is released.
File Set
IGVFDS1887NZWO
(single-nucleus RNA sequencing assay (10x multiome))
Summary
R2 reads from sequencing run 1
File Format
fastq
Content Type
reads
Aliases
igvf:corces_sequenceFile_RNA_RP025_G5_P070_L004_R2
md5sum
6399c8c40b8e0f08ae78b4dfa9441479
Content MD5sum
19db0d5bc429d10c7f8477bb207c312d
File Size
9.7 GB
Submitted File Name
Multiome_RNA_RP025_G5_L005_P070_S25_L004_R2_001.fastq.gz
Checkfiles Version
v20
Attribution
Ryan Corces, Gladstone Institute UCSF
(
HG012076
—
Ansuman Satpathy
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq X
Sequencing Run
1
Flowcell ID
19RTCA4LE
Lane
4
Sequencing Kit
NovaSeq X Series 10B Reagent Kit
Illumina Read Type
R2
Average Read Length
151
Read Count
145288501
Samples
1 item
Accession
Type
Sample Terms
Disease Terms
Summary
IGVFSM4968PVUL
MultiplexedSample
posterior cingulate gyrus
,
putamen
,
substantia nigra
Alzheimer disease
,
cerebral amyloid angiopathy
,
Parkinson's disease
multiplexed sample: Homo sapiens (male, 79 years) posterior cingulate gyrus tissue; Homo sapiens (male, 81 years) putamen tissue; ... and 8 more samples