IGVFFI9005WSAR

preview

validated

This object is in preview status. Metadata is subject to change until this object is released.

File Set

IGVFDS0990FCGR(single-nucleus RNA sequencing assay (10x multiome))

Summary

R1 reads from sequencing run 1

File Format

fastq

Content Type

reads

Aliases

igvf:corces_sequenceFile_RNA_X033_G2_P034_L002_R1

md5sum

0de0006d8d5f7f41d30aa463de04ae06

Content MD5sum

4efa0c24a5345fa10547fde6126124dd

File Size

15 GB

Submitted File Name

Multiome_RNA_X033_G2_L002_P034_S18_L002_R1_001.fastq.gz

Checkfiles Version

v20

Sequencing Details

Sequencing Platform

Illumina NovaSeq 6000

Sequencing Run

Flowcell ID

H2WFTDSX7

Lane

Sequencing Kit

NovaSeq 6000 S4 Reagent Kit v1.5

Illumina Read Type

Average Read Length

101

Read Count

227640771

Samples

1 item

Accession

Type

Sample Terms

Disease Terms

Summary

IGVFSM4629RUUR

MultiplexedSample

cerebellar cortex, middle temporal gyrus, posterior cingulate gyrus, putamen, substantia nigra

cerebral amyloid angiopathy, mild cognitive impairment, Parkinson's disease

multiplexed sample: Homo sapiens (male, 70 years) substantia nigra tissue associated with Parkinson's disease; Homo sapiens (male, 80 years) posterior cingulate gyrus tissue; ... and 10 more samples

Attribution

Award

HG012076

Principal Investigator(s)

Ansuman Satpathy

Contact P.I.

Ansuman Satpathy

Lab

Ryan Corces, Gladstone Institute UCSF