IGVFFI8998YGPT

preview

validated

This object is in preview status. Metadata is subject to change until this object is released.

File Set

IGVFDS6737HSKU(single-nucleus RNA sequencing assay (10x multiome))

Summary

I1 reads from sequencing run 1

File Format

fastq

Content Type

reads

Aliases

igvf:corces_sequenceFile_RNA_RP030_G7_P078_L008_I1

md5sum

5b1cc055299e94eacf08186b6938b554

Content MD5sum

4bfa484086f41c2d9178fe713af13ae3

File Size

1.3 GB

Submitted File Name

Multiome_RNA_RP030_G7_L007_P078_S79_L008_I1_001.fastq.gz

Checkfiles Version

v20

Attribution

Ryan Corces, Gladstone Institute UCSF

(

HG012076 — Ansuman Satpathy

)

Sequencing Details

Sequencing Platform

Illumina NovaSeq X

Sequencing Run

Flowcell ID

19UBCA4LE

Lane

Sequencing Kit

NovaSeq X Series 10B Reagent Kit

Illumina Read Type

Average Read Length

Read Count

176494142

Samples

1 item

Accession

Type

Sample Terms

Disease Terms

Summary

IGVFSM5420ZYPI

MultiplexedSample

middle temporal gyrus, posterior cingulate gyrus, putamen, substantia nigra

cerebral amyloid angiopathy, Parkinson's disease

multiplexed sample: Homo sapiens (female, 79 years) substantia nigra tissue associated with Parkinson's disease; Homo sapiens (male, 78 years) posterior cingulate gyrus tissue associated with Parkinson's disease; ... and 6 more samples