IGVFFI8975NPWA

released

validated

File Set

IGVFDS8375BGSZ(gRNA sequencing for mixed CRISPR FlowFISH screen integrating a guide (sgRNA) library targeting accessible genome regions in 36 genomic loci)

Summary

reads from sequencing run 1

File Format

fastq

Content Type

reads

Aliases

jesse-engreitz:auxiliary_file_CRUDO_PILOT_CCND1-Auxin0hrs-FF1-BinB-PCR3_S266

md5sum

ceeca611f7d54a0e994231a3e137508a

Content MD5sum

f08644cb29c563fa0bacaef4659e306e

File Size

8.5 MB

Submitted File Name

/oak/stanford/groups/engreitz/Projects/Cohesin/210301B002-CohesinFF/fastq/CCND1-Auxin0hrs-FF1-BinB-PCR3_S266_R1_001.fastq.gz

Sequencing Details

Sequencing Platform

Illumina HiSeq 2500

Sequencing Run

Index

ATTCCTCT:GTAC

Average Read Length

Read Count

364936

Samples

1 item

Accession

Type

Sample Terms

Summary

IGVFSM7863HHJP

InVitroSystem

HCT116

HCT116 cell line, male, Homo sapiens (sorting details: FACS bin B for 10-20% expression of CCND1) modified with CRISPRi Sp-dCas9-KOX1-KRAB, inactive AID system targeting RAD21, transfected with a guide library