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IGVFFI8910YNPE

released
validated
File Set
IGVFDS6770YNZR(single-cell ATAC-seq (SHARE-seq))
Summary
R2 reads from sequencing run 1
File Format
fastq
Content Type
reads
Aliases
buenrostro-bernstein:surya-DSS21BC-more2-1-ATAC.R2.fastq.gz
md5sum
f5c744c642d23a6f4fe94e78eef15eee
Content MD5sum
1669435f5fcb6d2c0cd982a85c074177
File Size
4.0 GB
Submitted File Name
gs://sw-igvf-submission/surya-mouse-colitis/submit-fqs/DSS21BC-more2-1-ATAC.R2.fastq.gz
Checkfiles Version
v14
Attribution
Jason Buenrostro, Broad

Sequencing Details

Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
1
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
R2
Average Read Length
77.22
Read Count
92262179

Samples

1 item
Accession
Type
Sample Terms
Summary
InVitroSystem
Mus musculus C57BL/6J colonic epithelium organoid induced to colon for 27 days

Files Derived From This File

1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
tsv
fragments
fragments
Jason Buenrostro, Broad
2.3 GB
validated

Associated seqspec Files

1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
yaml
seqspec
seqspec of IGVFFI2165FXVU, IGVFFI8910YNPE, IGVFFI9885LMTH
Jason Buenrostro, Broad
1.2 KB
validated