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INDEXED
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SequenceFile
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IGVFFI8907CLCZ
IGVFFI8907CLCZ
released
validated
Json view
File Set
IGVFDS8974KOJW
(single-cell RNA sequencing assay (SHARE-seq))
Summary
I1 reads from sequencing run 5
File Format
fastq
Content Type
reads
Aliases
buenrostro-bernstein:surya-DSS17-18-prim-5K-RNA.barcode.fastq.gz
md5sum
6c21f6e9eb221e3897ef25c858512fcb
Content MD5sum
f97f3ee5a9c202c91794e6c1476cbba8
File Size
504 MB
Submitted File Name
gs://sw-igvf-submission/surya-mouse-colitis/submit-fqs/barcode-file/DSS17-18-prim-5K-RNA.barcode.fastq.gz
Checkfiles Version
v19
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
5
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
I1
Average Read Length
32
Read Count
23667147
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM1242TZJM
PrimaryCell
colon
Mus musculus C57BL/6J colon cell
Associated seqspec Files
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI1447VWSA
yaml
seqspec
seqspec of IGVFFI2771WSPN, IGVFFI2657BIRH, IGVFFI8907CLCZ
Jason Buenrostro, Broad
1.2 KB
validated