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INDEXED
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SequenceFile
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IGVFFI8863LGOW
IGVFFI8863LGOW
released
validated
Json view
File Set
IGVFDS1851VUFY
(Parse SPLiT-seq)
Summary
R2 reads from sequencing run 4
File Format
fastq
Content Type
reads
md5sum
fe2f6e129590022f4a3c8f72c6b88c18
Content MD5sum
c70b6825ba7fc9f679de9ea0f0a45161
File Size
6.2 GB
Submitted File Name
igvf_009/nova1/igvf_009_B13_D_nova_N1_L004_R2.fastq.gz
Checkfiles Version
Legacy version of checkfiles
Attribution
Ali Mortazavi, UCI
(
HG012077
—
Ali Mortazavi
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
4
Flowcell ID
H5VJ5DSX7
Lane
4
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
R2
Average Read Length
86
Read Count
164954238
Samples
1 item
Accession
Type
Sample Terms
Disease Terms
Summary
IGVFSM2329KREU
MultiplexedSample
adrenal gland
,
kidney
multiplexed sample: Mus musculus WSB/EiJ (male, 69 days) kidney tissue; Mus musculus CAST/EiJ (male, 72 days) kidney tissue; ... and 126 more samples
Files Derived From This File
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI3489UMGJ
tar
sparse gene count matrix
cell by gene in sparse gene count matrix
Ali Mortazavi, UCI
1.4 GB
validated
Associated seqspec Files
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI4201QVES
yaml
seqspec
seqspec of IGVFFI8403KWOF, IGVFFI8863LGOW
Ali Mortazavi, UCI
1.3 KB
validated