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INDEXED
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SequenceFile
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IGVFFI8857LWNX
IGVFFI8857LWNX
released
validated
Json view
File Set
IGVFDS0727IJVU
(single-cell RNA sequencing assay (SHARE-seq))
Summary
R1 reads from sequencing run 4287
File Format
fastq
Content Type
reads
Aliases
buenrostro-bernstein:SS-LS_4287_R1
md5sum
98afac4f66dcb64987b6da70183b274b
Content MD5sum
336ffcdbd221e84d1333971a5eef3c90
File Size
562 MB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-525_L4_SS-PKR-172_2022-APRIL-R1-PLATE2-3rd-THIRD_R1.fastq.gz
Checkfiles Version
Legacy version of checkfiles
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
4287
Flowcell ID
H75F7DSX5
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
R1
Average Read Length
150
Read Count
8779226
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM8804KQRM
InVitroSystem
induced pluripotent stem cell
Homo sapiens induced pluripotent stem pooled differentiated cell specimen induced to hepatic oval stem cell for 7 days (cellular sub pool: SS-PKR 172)
Associated seqspec Files
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI6963HPQC
yaml
seqspec
seqspec of IGVFFI8857LWNX, IGVFFI3159AKGL, IGVFFI5009TIPN
Jason Buenrostro, Broad
1.4 KB
validated