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INDEXED
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SequenceFile
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IGVFFI8813RJXG
IGVFFI8813RJXG
released
validated
Json view
File Set
IGVFDS0535NZKF
(single-cell ATAC-seq (SHARE-seq))
Summary
R1 reads from sequencing run 4333
File Format
fastq
Content Type
reads
Aliases
buenrostro-bernstein:SS-LS_4333_R1
md5sum
c4e360c30a06372680080c45fe0d5199
Content MD5sum
50c192efb90c95936bbe29db0e108c48
File Size
2.6 GB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-552_L1_SS-PKR-177_SS-V1-2nd-THIRD_R1.fastq.gz
Checkfiles Version
Legacy version of checkfiles
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
4333
Flowcell ID
H75F7DSX5
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
R1
Average Read Length
150
Read Count
40916942
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM2100NGWA
InVitroSystem
induced pluripotent stem cell
Homo sapiens induced pluripotent stem pooled differentiated cell specimen induced to neural progenitor cell for 5 days (cellular sub pool: SS-PKR 177)
Associated seqspec Files
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI6338YHBC
yaml
seqspec
seqspec of IGVFFI8813RJXG, IGVFFI0358OKKL, IGVFFI3830PQKK
Jason Buenrostro, Broad
1.3 KB
validated