IGVFFI8792DEBF

preview

validated

This object is in preview status. Metadata is subject to change until this object is released.

File Set

IGVFDS7160XHZT(single-nucleus RNA sequencing assay (10x multiome))

Summary

I1 reads from sequencing run 1

File Format

fastq

Content Type

reads

Aliases

igvf:corces_sequenceFile_RNA_X046_G1_P048_L004_I1

md5sum

5362cc160d71fd077566c2aa2f1c940a

Content MD5sum

2c29b15e0a9c87b6f2cda5f8f8061caf

File Size

1.3 GB

Submitted File Name

Multiome_RNA_X046_G1_L001_P048_S13_L004_I1_001.fastq.gz

Checkfiles Version

v20

Sequencing Details

Sequencing Platform

Illumina NovaSeq 6000

Sequencing Run

Flowcell ID

H5VKTDSX7

Lane

Sequencing Kit

NovaSeq 6000 S4 Reagent Kit v1.5

Illumina Read Type

Average Read Length

Read Count

222860604

Samples

1 item

Accession

Type

Sample Terms

Disease Terms

Summary

IGVFSM2825UXQB

MultiplexedSample

cerebellar cortex, middle temporal gyrus, posterior cingulate gyrus, putamen, substantia nigra

Alzheimer disease, cerebral amyloid angiopathy, mild cognitive impairment, multiple sclerosis, Parkinson's disease

multiplexed sample: Homo sapiens (female, 78 years) putamen tissue associated with Parkinson's disease; Homo sapiens (male, 53 years) middle temporal gyrus tissue; ... and 10 more samples

Attribution

Award

HG012076

Principal Investigator(s)

Ansuman Satpathy

Contact P.I.

Ansuman Satpathy

Lab

Ryan Corces, Gladstone Institute UCSF