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INDEXED
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SequenceFile
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IGVFFI8780MEBA
IGVFFI8780MEBA
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This object is in preview status. Metadata is subject to change until this object is released.
File Set
IGVFDS9885KGYZ
(single-nucleus RNA sequencing assay (10x multiome))
Summary
R2 reads from sequencing run 1
File Format
fastq
Content Type
reads
Aliases
igvf:corces_sequenceFile_RNA_RP033_G1_P080_L006_R2
md5sum
51aaae11ca84f8d4cce6a4ef451aff85
Content MD5sum
d303822e247464d0d8ef06b99a99b4df
File Size
10 GB
Submitted File Name
Multiome_RNA_RP033_G1_L001_P080_S53_L006_R2_001.fastq.gz
Checkfiles Version
v20
Attribution
Ryan Corces, Gladstone Institute UCSF
(
HG012076
—
Ansuman Satpathy
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq X
Sequencing Run
1
Flowcell ID
19NHCA4LE
Lane
6
Sequencing Kit
NovaSeq X Series 10B Reagent Kit
Illumina Read Type
R2
Average Read Length
151
Read Count
151453014
Samples
1 item
Accession
Type
Sample Terms
Disease Terms
Summary
IGVFSM6670KYMT
MultiplexedSample
posterior cingulate gyrus
,
putamen
,
substantia nigra
cerebral amyloid angiopathy
,
Parkinson's disease
multiplexed sample: Homo sapiens (male, 70 years) substantia nigra tissue associated with Parkinson's disease; Homo sapiens (female, 70 years) substantia nigra tissue associated with Parkinson's disease; ... and 6 more samples