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INDEXED
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SequenceFile
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IGVFFI8770YVGL
IGVFFI8770YVGL
released
validated
Json view
File Set
IGVFDS4464LQXA
(single-cell RNA sequencing assay (SHARE-seq))
Summary
R2 reads from sequencing run 173
File Format
fastq
Content Type
reads
Aliases
bradley-bernstein:SS-LS_173_R2
bradley-bernstein:SS-LS_2120_R2
buenrostro-bernstein:SS-LS_173_R2
buenrostro-bernstein:SS-LS_2120_R2
md5sum
a68d97278aff334ca1e00e2b0a9240b8
Content MD5sum
bd9f71b390751af6d6267d53f052f53c
File Size
993 MB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-202_L2_SS-PKR-131_2022-APRIL-R1-PLATE2-ENTIRE-PLATE_R2.fastq.gz
Checkfiles Version
Legacy version of checkfiles
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
173
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
R2
Average Read Length
149
Read Count
20616294
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM9781HISX
Tissue
brain
Mus musculus C57BL/6 (female) brain tissue (cellular sub pool: SS-PKR 131)
Associated seqspec Files
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI2796FVAW
yaml
seqspec
seqspec of IGVFFI0446XXIA, IGVFFI8770YVGL
Jason Buenrostro, Broad
1.2 KB
validated