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INDEXED
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SequenceFile
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IGVFFI8739VSKK
IGVFFI8739VSKK
released
validated
Json view
File Set
IGVFDS0618QCGG
(single-cell RNA sequencing assay (SHARE-seq))
Summary
R1 reads from sequencing run 8297
File Format
fastq
Content Type
reads
Aliases
buenrostro-bernstein:SS-LS_8297_R1
md5sum
0d9b104fd9b300862ef42af19fdc5dc0
Content MD5sum
ba0af7378bb7e1560b2cd2e8f65e7c07
File Size
4.6 GB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-2167_L6_SS-PKR-528_SS-V1-LEFT-HALF_R1.fastq.gz
Checkfiles Version
v17
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq X
Sequencing Run
8297
Flowcell ID
22TMH5LT3
Sequencing Kit
NovaSeq X Series 10B Reagent Kit
Illumina Read Type
R1
Average Read Length
100
Read Count
86002464
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM6095NJDT
Tissue
left cerebral cortex
Mus musculus CAST/EiJ (female) left cerebral cortex tissue (cellular sub pool: SS-PKR 528)
Associated seqspec Files
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI6154ISKO
yaml
seqspec
seqspec of IGVFFI8739VSKK, IGVFFI9109NWCS
Jason Buenrostro, Broad
1.3 KB
validated