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INDEXED
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SequenceFile
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IGVFFI8737UTHR
IGVFFI8737UTHR
released
validated
Json view
File Set
IGVFDS0073HSBP
(single-cell ATAC-seq (SHARE-seq))
Summary
R1 reads from sequencing run 8382
File Format
fastq
Content Type
reads
Aliases
buenrostro-bernstein:SS-LS_8382_R1
md5sum
f1f2bd3bd2136a60fb0be85284de0b21
Content MD5sum
ea4a0f550a2be11db2116095075364a9
File Size
4.8 GB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-2252_L5_SS-PKR-603_SS-V1-LEFT-HALF_R1.fastq.gz
Checkfiles Version
v17
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq X
Sequencing Run
8382
Flowcell ID
22V3MJLT3
Sequencing Kit
NovaSeq X Series 10B Reagent Kit
Illumina Read Type
R1
Average Read Length
100
Read Count
117640598
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM1833ODAY
Tissue
left cerebral cortex
Mus musculus CAST/EiJ (male) left cerebral cortex tissue (cellular sub pool: SS-PKR 603)
Associated seqspec Files
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI3752VDCM
yaml
seqspec
seqspec of IGVFFI8737UTHR, IGVFFI3637RIIY
Jason Buenrostro, Broad
1.3 KB
validated