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INDEXED
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SequenceFile
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IGVFFI8711OWAV
IGVFFI8711OWAV
released
validated
Json view
File Set
IGVFDS2186PCOF
(snMCT-seq)
Summary
R2 reads from sequencing run 2
File Format
fastq
Content Type
reads
Aliases
chongyuan-luo:pgp_snmct_C39_day12_L2_R2
md5sum
d206339943e7913a3acc0f79486c1f88
Content MD5sum
5e3e3c6727da4ae008a874ff88e316e7
File Size
7.7 GB
Submitted File Name
/home/ec2-user/igvf/submit/fastq/year2/snmct/yzcl51/20231204-C39D12-Pos1-C08_S32_L002_R2_001.fastq.gz
Checkfiles Version
Legacy version of checkfiles
Submitter Comment
Changed from Novaseq 6000 to Novaseq X on 20250224
Sequencing Details
Sequencing Platform
Illumina NovaSeq X
Sequencing Run
2
Lane
2
Sequencing Kit
NovaSeq X Series 10B Reagent Kit
Illumina Read Type
R2
Average Read Length
149.01
Read Count
100050816
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM3009NMJU
InVitroSystem
fibroblast
fibroblast reprogrammed cell specimen induced to induced pluripotent stem cell for 12 days, Homo sapiens
Attribution
Award
HG012079
Principal Investigator(s)
Kathrin Plath
,
Noah Zaitlen
,
Chongyuan Luo
,
Jason Ernst
,
Roy Wollman
Contact P.I.
Chongyuan Luo
Lab
Chongyuan Luo, UCLA