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SequenceFile
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IGVFFI8709YCAQ
IGVFFI8709YCAQ
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This object is in preview status. Metadata is subject to change until this object is released.
File Set
IGVFDS2125XETL
(single-nucleus RNA sequencing assay (10x multiome))
Summary
R2 reads from sequencing run 1
File Format
fastq
Content Type
reads
Aliases
igvf:corces_sequenceFile_RNA_RP033_G3_P080_L007_R2
md5sum
d6eb8ebb3a4250ec92fcf5eb43d245fd
Content MD5sum
90e97e499a791d88a31d175733b64ec7
File Size
9.6 GB
Submitted File Name
Multiome_RNA_RP033_G3_L003_P080_S55_L007_R2_001.fastq.gz
Checkfiles Version
v20
Attribution
Ryan Corces, Gladstone Institute UCSF
(
HG012076
—
Ansuman Satpathy
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq X
Sequencing Run
1
Flowcell ID
19NHCA4LE
Lane
7
Sequencing Kit
NovaSeq X Series 10B Reagent Kit
Illumina Read Type
R2
Average Read Length
151
Read Count
140709149
Samples
1 item
Accession
Type
Sample Terms
Disease Terms
Summary
IGVFSM3528WKEF
MultiplexedSample
posterior cingulate gyrus
,
putamen
,
substantia nigra
cerebral amyloid angiopathy
,
Parkinson's disease
multiplexed sample: Homo sapiens (male, 70 years) substantia nigra tissue associated with Parkinson's disease; Homo sapiens (female, 70 years) substantia nigra tissue associated with Parkinson's disease; ... and 6 more samples