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INDEXED
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SequenceFile
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IGVFFI8688AZMU
IGVFFI8688AZMU
released
validated
Json view
File Set
IGVFDS9947GKSM
(single-cell RNA sequencing assay (SHARE-seq))
Summary
R1 reads from sequencing run 8365
File Format
fastq
Content Type
reads
Aliases
buenrostro-bernstein:SS-LS_8365_R1
md5sum
19f7f3b1ec72867d3f8a88d8036c5577
Content MD5sum
9d6a1c19cdf80b6d8850c920a3ade0ac
File Size
4.6 GB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-2219_L7_SS-PKR-583_SS-V1-LEFT-HALF_R1.fastq.gz
Checkfiles Version
v17
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq X
Sequencing Run
8365
Flowcell ID
22V3MJLT3
Sequencing Kit
NovaSeq X Series 10B Reagent Kit
Illumina Read Type
R1
Average Read Length
100
Read Count
109362997
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM8298OVYF
Tissue
left cerebral cortex
Mus musculus B6J (male) left cerebral cortex tissue (cellular sub pool: SS-PKR 583)
Associated seqspec Files
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI8340UCTH
yaml
seqspec
seqspec of IGVFFI8688AZMU, IGVFFI3885GAEG
Jason Buenrostro, Broad
1.3 KB
validated