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INDEXED
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SequenceFile
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IGVFFI8648VIPN
IGVFFI8648VIPN
released
validated
Json view
File Set
IGVFDS3537VLZQ
(single-cell ATAC-seq (SHARE-seq))
Summary
R1 reads from sequencing run 8770
File Format
fastq
Content Type
reads
Aliases
buenrostro-bernstein:SS-LS_8770_R1
md5sum
bb923bd2882410ff3943626f65dba904
Content MD5sum
81b48f2525965bca668c3f5c35271853
File Size
1.1 GB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-2312_L4_SS-PKR-182_SS-V1-1st-THIRD_R1.fastq.gz
Checkfiles Version
v20
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq X
Sequencing Run
8770
Flowcell ID
22LMVNLT4
Sequencing Kit
NovaSeq X Series 10B Reagent Kit
Illumina Read Type
R1
Average Read Length
100
Read Count
24726100
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM0308FMJQ
InVitroSystem
induced pluripotent stem cell
Homo sapiens induced pluripotent stem pooled cell specimen (cellular sub pool: SS-PKR 182)
Associated seqspec Files
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI2647BCBE
yaml
seqspec
seqspec of IGVFFI8648VIPN, IGVFFI1643VSGL, IGVFFI9244WPZM
Jason Buenrostro, Broad
1.3 KB
validated