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INDEXED
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SequenceFile
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IGVFFI8647WTOX
IGVFFI8647WTOX
released
validated
Json view
File Set
IGVFDS6289YQBN
(single-cell RNA sequencing assay (SHARE-seq))
Summary
R2 reads from sequencing run 3842
File Format
fastq
Content Type
reads
Aliases
buenrostro-bernstein:SS-LS_3842_R2
md5sum
2a51b96dd97d13f448736e720fc26814
Content MD5sum
329b97271c8f49e57ae6b7ce5eb47df7
File Size
1.9 GB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-1539_L2_SS-PKR-436_2022-APRIL-R1-SET-OF-192_R2.fastq.gz
Checkfiles Version
v17
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
3842
Flowcell ID
H22KKDRX5
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
R2
Average Read Length
199
Read Count
22945075
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM4321WQTD
Tissue
brain
Mus musculus C57BL/6 brain tissue (cellular sub pool: SS-PKR 436)
Associated seqspec Files
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI9557CSJM
yaml
seqspec
seqspec of IGVFFI4040KVJA, IGVFFI8647WTOX
Jason Buenrostro, Broad
1.3 KB
validated