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IGVFFI8636VWDT

released
validated
File Set
IGVFDS1771HEWD(Parse SPLiT-seq)
Summary
R1 reads from sequencing run 3
File Format
fastq
Content Type
reads
md5sum
c0f9661d21c2b0c3f73ff5b46c75888e
Content MD5sum
6b0c5477ad2c4e2c0eb68326d0252854
File Size
24 GB
Submitted File Name
igvf_008b/nova1/igvf_008b_B02_D_nova_N1_L003_R1.fastq.gz
Checkfiles Version
Legacy version of checkfiles
Attribution
Ali Mortazavi, UCI

Sequencing Details

Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
3
Flowcell ID
H5VF5DSX7
Lane
3
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
R1
Average Read Length
140
Read Count
358863075

Samples

1 item
Accession
Type
Sample Terms
Disease Terms
Summary
MultiplexedSample
multiplexed sample: Mus musculus AJ (male, 69 days) epididymis tissue; Mus musculus PWK/PhJ (female, 69 days) oviduct tissue; ... and 190 more samples

Files Derived From This File

1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
tar
sparse gene count matrix
cell by gene in sparse gene count matrix
Ali Mortazavi, UCI
1.5 GB
validated

Associated seqspec Files

1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
yaml
seqspec
seqspec of IGVFFI8636VWDT, IGVFFI9229GRTK
Ali Mortazavi, UCI
1.4 KB
validated