IGVFFI8631QTRA

preview

validated

This object is in preview status. Metadata is subject to change until this object is released.

File Set

IGVFDS1454DNXK(single-nucleus RNA sequencing assay (10x multiome))

Summary

I1 reads from sequencing run 1

File Format

fastq

Content Type

reads

Aliases

igvf:corces_sequenceFile_RNA_X024_G8_P024_L004_I1

md5sum

c22c863b3f85a06d2d40c50d072cf4fe

Content MD5sum

a0f2e734f6d133911b437503c57df8a3

File Size

1.3 GB

Submitted File Name

Multiome_RNA_X024_G8_L008_P024_S46_L004_I1_001.fastq.gz

Checkfiles Version

v20

Attribution

Ryan Corces, Gladstone Institute UCSF

(

HG012076 — Ansuman Satpathy

)

Sequencing Details

Sequencing Platform

Illumina NovaSeq 6000

Sequencing Run

Flowcell ID

HV7TNDSX5

Lane

Sequencing Kit

NovaSeq 6000 S4 Reagent Kit v1.5

Illumina Read Type

Average Read Length

Read Count

206781271

Samples

1 item

Accession

Type

Sample Terms

Disease Terms

Summary

IGVFSM4069JELD

MultiplexedSample

cerebellar cortex, middle temporal gyrus, posterior cingulate gyrus, putamen, substantia nigra

cerebral amyloid angiopathy, mild cognitive impairment, Parkinson's disease

multiplexed sample: Homo sapiens (male, 78 years) cerebellar cortex tissue associated with Parkinson's disease; Homo sapiens (male, 75 years) posterior cingulate gyrus tissue associated with Parkinson's disease; ... and 10 more samples