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IGVFFI8582SZNW

released
validated
File Set
IGVFDS3799RXYT(Proliferation CRISPR interference screen integrating a guide (sgRNA) library targeting phenotype-associated variants genome-wide associated with blood pressure)
Summary
R1 reads from sequencing run 1
File Format
fastq
Content Type
reads
Aliases
guillaume-lettre:BP_screen_KRAB_PROLIF_R4_2_read1
md5sum
98d399ab8aee7b07752a8fc25c09a438
Content MD5sum
9029f0eb2b27fc1802714cca3f34f7e4
File Size
1.2 GB
Submitted File Name
/home/lokensin/projects/rrg-glettre/sequencing_datastore/raw_data/CRISPR_IGVF_20230720/samples/NS.X0085.005.IndexR1_08.P2BPR4_R1.fastq.gz
Checkfiles Version
Legacy version of checkfiles
Attribution
Guillaume Lettre, MHI

Sequencing Details

Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
1
Sequencing Kit
NovaSeq 6000 SP Reagent Kit v1.5
Illumina Read Type
R1
Average Read Length
151
Read Count
28505311

Samples

1 item
Accession
Type
Sample Terms
Summary
InVitroSystem
Homo sapiens (female) TeloHAEC cell line modified with CRISPRi Sp-dCas9-KOX1-KRAB, transduced (lentivirus) with a guide library

Files Derived From This File

1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
csv
guide quantifications
guide quantifications
Guillaume Lettre, MHI
149 KB
validated