IGVFFI8548IENT

{
    "@context": "/terms/",
    "@id": "/sequence-files/IGVFFI8548IENT/",
    "@type": [
        "SequenceFile",
        "File",
        "Item"
    ],
    "accession": "IGVFFI8548IENT",
    "aliases": [
        "jesse-engreitz:220228_8merInsertion-THP1-Amp_PPIF_promoter-BioRep3-FFrep1-BinD-PCRrep1_R1"
    ],
    "audit": {
        "INTERNAL_ACTION": [
            {
                "category": "mismatched status",
                "detail": "Released sequence file [IGVFFI8548IENT](/sequence-files/IGVFFI8548IENT/) has in progress subobject auxiliary set [IGVFDS0022CVMN](/auxiliary-sets/IGVFDS0022CVMN/).",
                "level": 30,
                "level_name": "INTERNAL_ACTION",
                "name": "audit_item_status",
                "path": "/sequence-files/IGVFFI8548IENT/"
            }
        ]
    },
    "award": {
        "@id": "/awards/HG011972/",
        "component": "functional characterization"
    },
    "content_md5sum": "37f28150910b4869ab2390515e7ab3ad",
    "content_type": "reads",
    "controlled_access": false,
    "creation_timestamp": "2023-12-05T18:29:11.756447+00:00",
    "file_format": "fastq",
    "file_set": "/auxiliary-sets/IGVFDS0022CVMN/",
    "file_size": 6878171,
    "gene_list_for": [],
    "href": "/sequence-files/IGVFFI8548IENT/@@download/IGVFFI8548IENT.fastq.gz",
    "illumina_read_type": "R1",
    "index": "GAAGAAGT:ACTG",
    "input_file_for": [],
    "integrated_in": [],
    "lab": {
        "@id": "/labs/jesse-engreitz/",
        "title": "Jesse Engreitz, Stanford"
    },
    "loci_list_for": [],
    "maximum_read_length": 150,
    "md5sum": "484c54322b9044cd2a6b1a1abd6ff53d",
    "mean_read_length": 150,
    "minimum_read_length": 150,
    "read_count": 303352,
    "release_timestamp": "2023-12-21T00:16:49.506943+00:00",
    "s3_uri": "s3://igvf-files/2023/12/05/cc607f10-d2f9-4dee-8eb0-207b2761707e/IGVFFI8548IENT.fastq.gz",
    "schema_version": "14",
    "seqspecs": [],
    "sequencing_platform": "/platform-terms/EFO_0008566/",
    "sequencing_run": 2,
    "status": "released",
    "submitted_by": {
        "@id": "/users/f9e7cd82-a407-4a20-89ee-f4dc668b0cbe/",
        "title": "Michael Montgomery"
    },
    "submitted_file_name": "220426pPPIF_REPEAT-THP1-Gen8b-pPPIF-Amp_pPPIF-BioRep1-FFRep1-BinD-PCRrep1_S4_R1_001.fastq.gz",
    "summary": "R1 reads from sequencing run 2",
    "upload_status": "validated",
    "uuid": "cc607f10-d2f9-4dee-8eb0-207b2761707e"
}