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INDEXED
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SequenceFile
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IGVFFI8547WDDR
IGVFFI8547WDDR
released
validated
Json view
File Set
IGVFDS5177YHMM
(single-cell RNA sequencing assay (SHARE-seq))
Summary
R1 reads from sequencing run 3832
File Format
fastq
Content Type
reads
Aliases
buenrostro-bernstein:SS-LS_3832_R1
md5sum
e58854295164a1f48774820fd6dedb79
Content MD5sum
9722f438ea26a3c2cbfa194ae107e4a9
File Size
738 MB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-1537_L2_SS-PKR-436_2022-APRIL-R1-SET-OF-192_R1.fastq.gz
Checkfiles Version
v17
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
3832
Flowcell ID
H22KKDRX5
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
R1
Average Read Length
100
Read Count
15460945
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM4321WQTD
Tissue
brain
Mus musculus C57BL/6 brain tissue (cellular sub pool: SS-PKR 436)
Associated seqspec Files
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI6799PEMC
yaml
seqspec
seqspec of IGVFFI8547WDDR, IGVFFI4067FRSX
Jason Buenrostro, Broad
1.3 KB
validated