Home
Home
Search (⌘K or ⌃K)
Data
Methodology
Data Model
About
Help
Sign In
INDEXED
Home
/
SequenceFile
/
IGVFFI8541VVLV
IGVFFI8541VVLV
preview
validated
Json view
This object is in preview status. Metadata is subject to change until this object is released.
File Set
IGVFDS8004HLTL
(10x multiome with scMito-seq)
Summary
R1 reads from sequencing run 1
File Format
fastq
Content Type
reads
Aliases
leif-ludwig:measurement2306820102_scATAC_R1_005
md5sum
5734f1e5c836ee382897fae98539def8
Content MD5sum
81097af34f2eeb3c5e647ea1991c0ad1
File Size
2.7 GB
Submitted File Name
/data/cephfs-1/work/groups/ludwig/scratch/IGVF/fastq/A4859/hPBMC_2306820102_Multiome_ATAC_S4_L005_R1_001.fastq.gz
Checkfiles Version
v17
Attribution
Leif Ludwig, MDC
(
HG012076
—
Ansuman Satpathy
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq X Plus
Sequencing Run
1
Flowcell ID
22VLC5LT3
Lane
5
Sequencing Kit
NovaSeq X Series 10B Reagent Kit
Illumina Read Type
R1
Average Read Length
101
Read Count
55390010
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM1838ENPX
PrimaryCell
peripheral blood mononuclear cell
Homo sapiens (male, 26 years) peripheral blood mononuclear cell
Associated seqspec Files
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI9719OTEC
yaml
seqspec
seqspec of IGVFFI8541VVLV, IGVFFI0483PXET, IGVFFI1834LZXI
Leif Ludwig, MDC
1.5 KB
validated