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SequenceFile
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IGVFFI8507PRTU
IGVFFI8507PRTU
released
validated
Json view
File Set
IGVFDS4938RHAV
(single-cell ATAC-seq (SHARE-seq))
Summary
R1 reads from sequencing run 3878
File Format
fastq
Content Type
reads
Aliases
buenrostro-bernstein:SS-LS_3878_R1
md5sum
0263781c97d480c813883b03cefbd47c
Content MD5sum
282d07abaaa3e5eac37d28420ccb925d
File Size
1.2 GB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-777_L4_SS-PKR-176_2022-APRIL-R1-PLATE2-3rd-THIRD_R1.fastq.gz
Checkfiles Version
Legacy version of checkfiles
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq X
Sequencing Run
3878
Flowcell ID
22523KLT3
Sequencing Kit
NovaSeq X Series 10B Reagent Kit
Illumina Read Type
R1
Average Read Length
150
Read Count
23411148
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM2637MMKV
InVitroSystem
induced pluripotent stem cell
Homo sapiens induced pluripotent stem pooled differentiated cell specimen induced to hepatic oval stem cell for 7 days (cellular sub pool: SS-PKR 176)
Associated seqspec Files
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI7360RGED
yaml
seqspec
seqspec of IGVFFI8507PRTU, IGVFFI2677WNDN, IGVFFI7457ILRH
Jason Buenrostro, Broad
1.3 KB
validated