IGVFFI8497POFW

preview

validated

This object is in preview status. Metadata is subject to change until this object is released.

File Set

IGVFDS8073HHQK(single-nucleus RNA sequencing assay (10x multiome))

Summary

I1 reads from sequencing run 1

File Format

fastq

Content Type

reads

Aliases

igvf:corces_sequenceFile_RNA_X035_G2_P036_L004_I1

md5sum

df6b9061f1833f125c412c5fd0e87f2a

Content MD5sum

131919f95d4aca09fc714ab55312e31e

File Size

1.4 GB

Submitted File Name

Multiome_RNA_X035_G2_L002_P036_S48_L004_I1_001.fastq.gz

Checkfiles Version

v20

Attribution

Ryan Corces, Gladstone Institute UCSF

(

HG012076 — Ansuman Satpathy

)

Sequencing Details

Sequencing Platform

Illumina NovaSeq 6000

Sequencing Run

Flowcell ID

H2WFTDSX7

Lane

Sequencing Kit

NovaSeq 6000 S4 Reagent Kit v1.5

Illumina Read Type

Average Read Length

Read Count

211938414

Samples

1 item

Accession

Type

Sample Terms

Disease Terms

Summary

IGVFSM0834XHYE

MultiplexedSample

cerebellar cortex, middle temporal gyrus, posterior cingulate gyrus, putamen, substantia nigra

mild cognitive impairment, Parkinson's disease

multiplexed sample: Homo sapiens (male, 89 years) substantia nigra tissue; Homo sapiens (female, 84 years) putamen tissue associated with Parkinson's disease; ... and 10 more samples