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INDEXED
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SequenceFile
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IGVFFI8489AOBV
IGVFFI8489AOBV
released
validated
Json view
File Set
IGVFDS6788EJWD
(single-cell RNA sequencing assay (SHARE-seq))
Summary
R1 reads from sequencing run 8326
File Format
fastq
Content Type
reads
Aliases
buenrostro-bernstein:SS-LS_8326_R1
md5sum
f9a57a6f4eb70b54a1fed551645e8deb
Content MD5sum
0e0bf4e7b24b78901e5c0b1fd12adecb
File Size
4.1 GB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-2180_L7_SS-PKR-583_SS-V1-RIGHT-HALF_R1.fastq.gz
Checkfiles Version
v17
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq X
Sequencing Run
8326
Flowcell ID
22TMH5LT3
Sequencing Kit
NovaSeq X Series 10B Reagent Kit
Illumina Read Type
R1
Average Read Length
100
Read Count
91999953
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM3008DKJO
Tissue
left cerebral cortex
Mus musculus CAST/EiJ (female) left cerebral cortex tissue (cellular sub pool: SS-PKR 583)
Associated seqspec Files
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI2565WUYM
yaml
seqspec
seqspec of IGVFFI8489AOBV, IGVFFI1480BRSU
Jason Buenrostro, Broad
1.3 KB
validated