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INDEXED
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SequenceFile
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IGVFFI8482BESS
IGVFFI8482BESS
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This object is in preview status. Metadata is subject to change until this object is released.
File Set
IGVFDS9901CQZL
(single-nucleus RNA sequencing assay (10x multiome))
Summary
I2 reads from sequencing run 1
File Format
fastq
Content Type
reads
Aliases
igvf:corces_sequenceFile_RNA_RP033_G6_P080_L008_I2
md5sum
4806af9f67b16f62165a7ef975077855
Content MD5sum
9809e2605e14c56a83db4caf68499f25
File Size
954 MB
Submitted File Name
Multiome_RNA_RP033_G6_L006_P080_S58_L008_I2_001.fastq.gz
Checkfiles Version
v20
Attribution
Ryan Corces, Gladstone Institute UCSF
(
HG012076
—
Ansuman Satpathy
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq X
Sequencing Run
1
Flowcell ID
19NHCA4LE
Lane
8
Sequencing Kit
NovaSeq X Series 10B Reagent Kit
Illumina Read Type
I2
Average Read Length
10
Read Count
128305587
Samples
1 item
Accession
Type
Sample Terms
Disease Terms
Summary
IGVFSM9620UKJQ
MultiplexedSample
posterior cingulate gyrus
,
putamen
,
substantia nigra
cerebral amyloid angiopathy
,
Parkinson's disease
multiplexed sample: Homo sapiens (male, 70 years) substantia nigra tissue associated with Parkinson's disease; Homo sapiens (female, 70 years) substantia nigra tissue associated with Parkinson's disease; ... and 6 more samples