IGVFFI8448NRZF

preview

validated

This object is in preview status. Metadata is subject to change until this object is released.

File Set

IGVFDS2675HBRY(single-nucleus RNA sequencing assay (10x multiome))

Summary

I2 reads from sequencing run 1

File Format

fastq

Content Type

reads

Aliases

igvf:corces_sequenceFile_RNA_X028_G4_P028_L004_I2

md5sum

4f547ef844f8153ab5dad729f2e8a6cf

Content MD5sum

2ef5d1a5cc8bf4f7c26ef2ab33537631

File Size

1.6 GB

Submitted File Name

Multiome_RNA_X028_G4_L004_P028_S21_L004_I2_001.fastq.gz

Checkfiles Version

v20

Attribution

Ryan Corces, Gladstone Institute UCSF

(

HG012076 — Ansuman Satpathy

)

Sequencing Details

Sequencing Platform

Illumina NovaSeq 6000

Sequencing Run

Flowcell ID

HV737DSX5

Lane

Sequencing Kit

NovaSeq 6000 S4 Reagent Kit v1.5

Illumina Read Type

Average Read Length

Read Count

243955226

Samples

1 item

Accession

Type

Sample Terms

Disease Terms

Summary

IGVFSM4873ZKQI

MultiplexedSample

cerebellar cortex, middle temporal gyrus, posterior cingulate gyrus, putamen, substantia nigra

cerebral amyloid angiopathy, mild cognitive impairment, Parkinson's disease

multiplexed sample: Homo sapiens (female, 79 years) substantia nigra tissue associated with Parkinson's disease; Homo sapiens (female, 82 years) middle temporal gyrus tissue associated with cerebral amyloid angiopathy; ... and 10 more samples