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INDEXED
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SequenceFile
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IGVFFI8444CEGX
IGVFFI8444CEGX
released
validated
Json view
File Set
IGVFDS1628VOEK
(single-cell ATAC-seq (SHARE-seq))
Summary
R1 reads from sequencing run 3923
File Format
fastq
Content Type
reads
Aliases
buenrostro-bernstein:SS-LS_3923_R1
md5sum
fd318afa0b73c1a6579b1cff1e42e5a0
Content MD5sum
6aaefb5d63c645d108417b9dda838e0b
File Size
1.2 GB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-783_L5_SS-PKR-177_2022-APRIL-R1-PLATE2-3rd-THIRD_R1.fastq.gz
Checkfiles Version
Legacy version of checkfiles
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq X
Sequencing Run
3923
Flowcell ID
22523KLT3
Sequencing Kit
NovaSeq X Series 10B Reagent Kit
Illumina Read Type
R1
Average Read Length
150
Read Count
21983068
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM4166RBAA
InVitroSystem
induced pluripotent stem cell
Homo sapiens induced pluripotent stem pooled differentiated cell specimen induced to hepatic oval stem cell for 7 days (cellular sub pool: SS-PKR 177)
Associated seqspec Files
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI3783ZJSP
yaml
seqspec
seqspec of IGVFFI8444CEGX, IGVFFI2630TNIM, IGVFFI2438NYEW
Jason Buenrostro, Broad
1.3 KB
validated