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SequenceFile
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IGVFFI8443EXUG
IGVFFI8443EXUG
released
validated
Json view
File Set
IGVFDS3084WPPQ
(single-cell ATAC-seq (SHARE-seq))
Summary
R1 reads from sequencing run 8497
File Format
fastq
Content Type
reads
Aliases
buenrostro-bernstein:SS-LS_8497_R1
md5sum
d48e90e4303b6a9240f275f5a74f563b
Content MD5sum
aa5e89a918dd75867b8a4936cba3cd55
File Size
1.5 GB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-2327_L1_SS-PKR-188_2022-APRIL-R1-PLATE2-1st-THIRD_R1.fastq.gz
Checkfiles Version
v20
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq X
Sequencing Run
8497
Flowcell ID
22LMVNLT4
Sequencing Kit
NovaSeq X Series 10B Reagent Kit
Illumina Read Type
R1
Average Read Length
100
Read Count
34217058
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM9051KVVO
InVitroSystem
induced pluripotent stem cell
Homo sapiens induced pluripotent stem pooled differentiated cell specimen induced to endodermal cell for 2 days (cellular sub pool: SS-PKR 188)
Associated seqspec Files
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI7110UQHB
yaml
seqspec
seqspec of IGVFFI8443EXUG, IGVFFI3268GRUW, IGVFFI8205UIVZ
Jason Buenrostro, Broad
1.3 KB
validated