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INDEXED
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SequenceFile
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IGVFFI8443EAOL
IGVFFI8443EAOL
released
validated
Json view
File Set
IGVFDS1149ZGJI
(single-cell ATAC-seq (SHARE-seq))
Summary
R1 reads from sequencing run 8396
File Format
fastq
Content Type
reads
Aliases
buenrostro-bernstein:SS-LS_8396_R1
md5sum
604ecb626400db021a31a992ce50c200
Content MD5sum
f6d07a7a5a069ba4ca92bf016a838d68
File Size
2.8 GB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-2256_L6_SS-PKR-605_SS-V1-LEFT-HALF_R1.fastq.gz
Checkfiles Version
v17
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq X
Sequencing Run
8396
Flowcell ID
22V3MJLT3
Sequencing Kit
NovaSeq X Series 10B Reagent Kit
Illumina Read Type
R1
Average Read Length
100
Read Count
68950787
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM5413AOMQ
Tissue
left cerebral cortex
Mus musculus CAST/EiJ (male) left cerebral cortex tissue (cellular sub pool: SS-PKR 605)
Associated seqspec Files
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI5933EMEO
yaml
seqspec
seqspec of IGVFFI8443EAOL, IGVFFI9668YPPC
Jason Buenrostro, Broad
1.3 KB
validated