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INDEXED
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SequenceFile
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IGVFFI8415CGJD
IGVFFI8415CGJD
released
validated
Json view
File Set
IGVFDS0902CUFX
(single-nucleus RNA sequencing assay (10x multiome))
Summary
I1 reads from sequencing run 1
File Format
fastq
Content Type
reads
Aliases
ansuman-satpathy:igvf_mouse_bridge_113_rna_i1
md5sum
c420da73c5bafafdb5e91016e55d2665
Content MD5sum
8a561b53a53f75ac52224430935a22be
File Size
2.0 GB
Submitted File Name
/oak/stanford/projects/igvf/Projects/230622_IGVF_Bridge_McGinnis/GEX/RNA_113_S4_L004_I1_001.fastq.gz
Checkfiles Version
Legacy version of checkfiles
Attribution
Ansuman Satpathy, Stanford
(
HG012076
—
Ansuman Satpathy
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
1
Flowcell ID
HW2WLDSX5
Lane
4
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
I1
Average Read Length
10
Read Count
361028525
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM5224XSCM
Tissue
left cerebral cortex
Mus musculus C57BL/6J (male, 10 weeks) left cerebral cortex tissue
Associated seqspec Files
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI7722HFMM
yaml
seqspec
seqspec of IGVFFI6614UUZN, IGVFFI7053EBEV, IGVFFI8415CGJD, IGVFFI0270AYYG
Ansuman Satpathy, Stanford
1.4 KB
validated