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INDEXED
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SequenceFile
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IGVFFI8400YXXT
IGVFFI8400YXXT
released
validated
Json view
File Set
IGVFDS9761JBSK
(reporter library targeting random selections genome-wide)
Summary
R2 reads from sequencing run 1
File Format
fastq
Content Type
reads
Aliases
tim-reddy:starr-seq-dna-fastq-k562-P010-R2
md5sum
eb823147aa710f1a9317e1d214e88038
Content MD5sum
43eb3109f6bd87aecaa52ce1eed4f4e1
File Size
7.4 GB
Submitted File Name
/data/reddylab/Alex/IGVF/data_submissions/raw_data/AIM_1_STARR_seq/K562.starrseq.dna.pool10.R2.fastq.gz
Checkfiles Version
v17
Attribution
Tim Reddy, Duke
(
HG012053
—
Charles Gersbach
)
Sequencing Details
Sequencing Platform
Illumina NextSeq 2000
Sequencing Run
1
Flowcell ID
AACNYKFM5
Lane
1
Sequencing Kit
NextSeq 2000 P3 XLEAP-SBS Reagent Kit
Illumina Read Type
R2
Average Read Length
301
Read Count
47649990
Files Derived From This File
2 items
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI9296PRAF
bam
alignments
custom assembly unfiltered alignments
Tim Reddy, Duke
7.2 GB
validated
IGVFFI9674XWSK
bam
alignments
GRCh38 unfiltered alignments
Tim Reddy, Duke
7.0 GB
validated