{
"@context": "/terms/",
"@id": "/sequence-files/IGVFFI8365HPGR/",
"@type": [
"SequenceFile",
"File",
"Item"
],
"accession": "IGVFFI8365HPGR",
"aliases": [
"jesse-engreitz:220829_8merInsertion-Jurkat_Stimulation-Amp_PPIF_promoter-BioRep3-FFrep1-BinC-PCRrep2_R2"
],
"audit": {
"INTERNAL_ACTION": [
{
"category": "mismatched status",
"detail": "Released sequence file [IGVFFI8365HPGR](/sequence-files/IGVFFI8365HPGR/) has in progress subobject auxiliary set [IGVFDS8946XMPW](/auxiliary-sets/IGVFDS8946XMPW/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/sequence-files/IGVFFI8365HPGR/"
}
]
},
"award": {
"@id": "/awards/HG011972/",
"component": "functional characterization"
},
"content_md5sum": "4a6adb91e143e88e7c28798b49b03c8f",
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2023-12-05T20:16:50.613869+00:00",
"file_format": "fastq",
"file_set": "/auxiliary-sets/IGVFDS8946XMPW/",
"file_size": 13570142,
"gene_list_for": [],
"href": "/sequence-files/IGVFFI8365HPGR/@@download/IGVFFI8365HPGR.fastq.gz",
"illumina_read_type": "R2",
"index": "CAGCGGTA:ACTG",
"input_file_for": [],
"integrated_in": [],
"lab": {
"@id": "/labs/jesse-engreitz/",
"title": "Jesse Engreitz, Stanford"
},
"loci_list_for": [],
"maximum_read_length": 150,
"md5sum": "3b2d1660baaafbd697a601d30289d796",
"mean_read_length": 150,
"minimum_read_length": 150,
"read_count": 384358,
"release_timestamp": "2023-12-20T23:58:32.761895+00:00",
"s3_uri": "s3://igvf-files/2023/12/05/87c0c115-fbff-42b7-a051-aafe50bd493b/IGVFFI8365HPGR.fastq.gz",
"schema_version": "14",
"seqspecs": [],
"sequencing_platform": "/platform-terms/EFO_0008566/",
"sequencing_run": 1,
"status": "released",
"submitted_by": {
"@id": "/users/f9e7cd82-a407-4a20-89ee-f4dc668b0cbe/",
"title": "Michael Montgomery"
},
"submitted_file_name": "220829_pPPIF_JurkatVFF-Jurkat-PE2A-BFP-pPPIF-Amp_pPPIF2_S17-BioRep3-FFRep1-BinC-PCRrep2_S200_R2_001.fastq.gz",
"summary": "R2 reads from sequencing run 1",
"upload_status": "validated",
"uuid": "87c0c115-fbff-42b7-a051-aafe50bd493b"
}