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INDEXED
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SequenceFile
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IGVFFI8354RXRJ
IGVFFI8354RXRJ
released
validated
Json view
File Set
IGVFDS0877CWMW
(single-cell RNA sequencing assay (SHARE-seq))
Summary
R2 reads from sequencing run 61
File Format
fastq
Content Type
reads
Aliases
bradley-bernstein:SS-LS_1983_R2
bradley-bernstein:SS-LS_61_R2
buenrostro-bernstein:SS-LS_1983_R2
buenrostro-bernstein:SS-LS_61_R2
md5sum
49a23470173175ac262064532127d8c2
Content MD5sum
ac41dd841dac93ffb2d5c97fe9647702
File Size
709 MB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-136_L1_SS-PKR-130_SS-V1-LEFT-HALF_R2.fastq.gz
Checkfiles Version
Legacy version of checkfiles
Sequencing Details
Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
61
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
R2
Average Read Length
149
Read Count
15369362
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM8719IQYM
Tissue
brain
Mus musculus C57BL/6 (female) brain tissue (cellular sub pool: SS-PKR 130)
Associated seqspec Files
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI5867RRUA
yaml
seqspec
seqspec of IGVFFI0633GTTI, IGVFFI8354RXRJ
Jason Buenrostro, Broad
1.2 KB
validated
Attribution
Award
HG011986
Principal Investigator(s)
Bradley Bernstein
,
Jason Buenrostro
Contact P.I.
Jason Buenrostro
Lab
Jason Buenrostro, Broad