IGVFFI8350OALY

preview

validated

This object is in preview status. Metadata is subject to change until this object is released.

File Set

IGVFDS2315CNRX(single-nucleus ATAC-seq (10x multiome))

Summary

R3 reads from sequencing run 1

File Format

fastq

Content Type

reads

Aliases

igvf:corces_sequenceFile_ATAC_X028_G8_P027_L003_R3

md5sum

b6c1184aa038c1158afeb95932900d6e

Content MD5sum

901b80ac7d22b00b99a8bdbf0b0f5d8c

File Size

7.5 GB

Submitted File Name

Multiome_ATAC_X028_G8_L008_P027_S25_L003_R3_001.fastq.gz

Checkfiles Version

v20

Attribution

Ryan Corces, Gladstone Institute UCSF

(

HG012076 — Ansuman Satpathy

)

Sequencing Details

Sequencing Platform

Illumina NovaSeq 6000

Sequencing Run

Flowcell ID

HV737DSX5

Lane

Sequencing Kit

NovaSeq 6000 S4 Reagent Kit v1.5

Illumina Read Type

Average Read Length

Read Count

241220301

Samples

1 item

Accession

Type

Sample Terms

Disease Terms

Summary

IGVFSM8232WDCF

MultiplexedSample

cerebellar cortex, middle temporal gyrus, posterior cingulate gyrus, putamen, substantia nigra

cerebral amyloid angiopathy, mild cognitive impairment, Parkinson's disease

multiplexed sample: Homo sapiens (female, 79 years) substantia nigra tissue associated with Parkinson's disease; Homo sapiens (female, 82 years) middle temporal gyrus tissue associated with cerebral amyloid angiopathy; ... and 10 more samples