Home
Home
Search (⌘K or ⌃K)
Data
Methodology
Data Model
About
Help
Sign In
INDEXED
Home
/
SequenceFile
/
IGVFFI8319FJLW
IGVFFI8319FJLW
released
validated
Json view
File Set
IGVFDS4642GQLX
(single-cell ATAC-seq (SHARE-seq))
Summary
R1 reads from sequencing run 8693
File Format
fastq
Content Type
reads
Aliases
buenrostro-bernstein:SS-LS_8693_R1
md5sum
38218703d3d0a51289a08195f579124e
Content MD5sum
b1e4ad0b44f3295f7d7912eb0070b58f
File Size
866 MB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-2331_L3_SS-PKR-199_2022-APRIL-R1-PLATE2-2nd-THIRD_R1.fastq.gz
Checkfiles Version
v20
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq X
Sequencing Run
8693
Flowcell ID
22LMVNLT4
Sequencing Kit
NovaSeq X Series 10B Reagent Kit
Illumina Read Type
R1
Average Read Length
100
Read Count
19474395
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM0636UWGR
InVitroSystem
induced pluripotent stem cell
Homo sapiens induced pluripotent stem pooled differentiated cell specimen induced to hepatic oval stem cell for 4 days (cellular sub pool: SS-PKR 199)
Associated seqspec Files
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI7950XYJO
yaml
seqspec
seqspec of IGVFFI8319FJLW, IGVFFI3486SKIN, IGVFFI0616GHKB
Jason Buenrostro, Broad
1.3 KB
validated