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IGVFFI8305JJZD

released
validated
File Set
IGVFDS2721AQQO(single-cell ATAC-seq (SHARE-seq))
Summary
R1 reads from sequencing run 174
File Format
fastq
Content Type
reads
Aliases
bradley-bernstein:SS-LS_174_R1
buenrostro-bernstein:SS-LS_174_R1
md5sum
3bc3a2b2fff18639514f76be143eff11
Content MD5sum
dbb4e510187ea802d077feec7206eae8
File Size
5.6 GB
Submitted File Name
gs://fc-7b87fd5f-6af3-4823-befa-ac5875469fa1/BMMC_single_donor_ATAC_L001_R1.fastq.gz
Submitter Comment
This fastq has already been prefiltered with IGVFDS9814BQOF barcode onlist.

Sequencing Details

Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
174
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
R1
Average Read Length
50
Read Count
213822431

Samples

1 item
Accession
Type
Sample Terms
Summary
PrimaryCell
bone marrow cell (cellular sub pool: SS-PKR 212), Homo sapiens

Files Derived From This File

1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
tsv
fragments
GRCh38 fragments
Jason Buenrostro, Broad
13 GB
validated

Associated seqspec Files

1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
yaml
seqspec
seqspec of IGVFFI8305JJZD, IGVFFI1456HVZR
Jason Buenrostro, Broad
1.2 KB
validated

Attribution

Award
HG011986
Principal Investigator(s)
Contact P.I.
Jason Buenrostro
Lab
Jason Buenrostro, Broad