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INDEXED
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SequenceFile
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IGVFFI8294TYFC
IGVFFI8294TYFC
released
validated
Json view
File Set
IGVFDS1816FCQL
(single-cell RNA sequencing assay (SHARE-seq))
Summary
R1 reads from sequencing run 3851
File Format
fastq
Content Type
reads
Aliases
buenrostro-bernstein:SS-LS_3851_R1
md5sum
6be1248dda88816adfe25a2b40d2809d
Content MD5sum
87fb277e1ba2802451ff194150c57619
File Size
800 MB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-1534_L2_SS-PKR-434_2022-APRIL-R1-SET-OF-192_R1.fastq.gz
Checkfiles Version
v17
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
3851
Flowcell ID
H22KKDRX5
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
R1
Average Read Length
100
Read Count
16566983
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM2881UHTO
Tissue
brain
Mus musculus C57BL/6 brain tissue (cellular sub pool: SS-PKR 434)
Associated seqspec Files
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI5292TPOX
yaml
seqspec
seqspec of IGVFFI8294TYFC, IGVFFI8794VJYW
Jason Buenrostro, Broad
1.3 KB
validated