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INDEXED
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SequenceFile
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IGVFFI8290JVXY
IGVFFI8290JVXY
released
validated
Json view
File Set
IGVFDS3368OEWN
(single-cell ATAC-seq (SHARE-seq))
Summary
R1 reads from sequencing run 5364
File Format
fastq
Content Type
reads
Aliases
buenrostro-bernstein:SS-LS_5364_R1
md5sum
ca32ae49b4318a37badd9ab998eb50b8
Content MD5sum
e00c4ac229be82b1f0a596df9a030df4
File Size
7.4 GB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-1574_L2_SS-PKR-432_2022-APRIL-R1-SET-OF-192_R1.fastq.gz
Checkfiles Version
v17
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
5364
Flowcell ID
22KHF5LT3
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
R1
Average Read Length
100
Read Count
167334739
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM1149LLIF
Tissue
brain
Mus musculus C57BL/6 brain tissue (cellular sub pool: SS-PKR 432)
Associated seqspec Files
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI7196DBBJ
yaml
seqspec
seqspec of IGVFFI8290JVXY, IGVFFI4821ALYL
Jason Buenrostro, Broad
1.3 KB
validated