Home
Home
Search (⌘K or ⌃K)
Data
Methodology
Data Model
About
Help
Sign In
INDEXED
Home
/
SequenceFile
/
IGVFFI8286MGPJ
IGVFFI8286MGPJ
released
validated
Json view
File Set
IGVFDS4124BSHW
(single-cell ATAC-seq (SHARE-seq))
Summary
R1 reads from sequencing run 1000
File Format
fastq
Content Type
reads
Aliases
buenrostro-bernstein:SS-LS_1000_R1
md5sum
77fe913559f0de0aeca55ba444eddec8
Content MD5sum
debb13e3e6d7221fe0847b8cb7bcded5
File Size
518 MB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-971_L2_SS-PKR-205_SS-V1-3rd-THIRD_R1.fastq.gz
Checkfiles Version
Legacy version of checkfiles
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq X
Sequencing Run
1000
Flowcell ID
22773CLT3
Sequencing Kit
NovaSeq X Series 10B Reagent Kit
Illumina Read Type
R1
Average Read Length
150
Read Count
8800056
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM1100PPNI
InVitroSystem
induced pluripotent stem cell
Homo sapiens induced pluripotent stem pooled differentiated cell specimen induced to neural progenitor cell for 10 days (cellular sub pool: SS-PKR 205)
Associated seqspec Files
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI4267ZFYV
yaml
seqspec
seqspec of IGVFFI8286MGPJ, IGVFFI0024BRJC, IGVFFI1925YYRY
Jason Buenrostro, Broad
1.3 KB
validated