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INDEXED
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SequenceFile
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IGVFFI8283RCMF
IGVFFI8283RCMF
released
validated
Json view
File Set
IGVFDS8970MJXV
(single-cell ATAC-seq (SHARE-seq))
Summary
R1 reads from sequencing run 3868
File Format
fastq
Content Type
reads
Aliases
buenrostro-bernstein:SS-LS_3868_R1
md5sum
d97820c66cbd5769995667f9d1538b10
Content MD5sum
3771e9959dcb28409c7fa96fd5b8c547
File Size
1.1 GB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-770_L4_SS-PKR-172_SS-V1-3rd-THIRD_R1.fastq.gz
Checkfiles Version
Legacy version of checkfiles
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq X
Sequencing Run
3868
Flowcell ID
22523KLT3
Sequencing Kit
NovaSeq X Series 10B Reagent Kit
Illumina Read Type
R1
Average Read Length
150
Read Count
20773998
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM7032AAKE
InVitroSystem
induced pluripotent stem cell
Homo sapiens induced pluripotent stem pooled differentiated cell specimen induced to neural progenitor cell for 10 days (cellular sub pool: SS-PKR 172)
Associated seqspec Files
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI2632XGWV
yaml
seqspec
seqspec of IGVFFI8283RCMF, IGVFFI8914PVPA, IGVFFI6700WGGF
Jason Buenrostro, Broad
1.3 KB
validated