IGVFFI8270QBJU

preview

validated

This object is in preview status. Metadata is subject to change until this object is released.

File Set

IGVFDS2649MJUU(single-nucleus RNA sequencing assay (10x multiome))

Summary

R1 reads from sequencing run 2

File Format

fastq

Content Type

reads

Aliases

igvf:corces_sequenceFile_RNA_X054_G7_P072_L002_R1

md5sum

cedc9a7c9d5973b81e58bdb0fabe70a0

Content MD5sum

d24369370b79f7a813ac515415f428b7

File Size

13 GB

Submitted File Name

Multiome_RNA_X054_G7_L007_P072_S19_L002_R1_001.fastq.gz

Checkfiles Version

v20

Attribution

Ryan Corces, Gladstone Institute UCSF

(

HG012076 — Ansuman Satpathy

)

Sequencing Details

Sequencing Platform

Illumina NovaSeq X

Sequencing Run

Flowcell ID

19UBCA4LE

Lane

Sequencing Kit

NovaSeq X Series 10B Reagent Kit

Illumina Read Type

Average Read Length

151

Read Count

151333313

Samples

1 item

Accession

Type

Sample Terms

Disease Terms

Summary

IGVFSM5537DDNC

MultiplexedSample

cerebellar cortex, middle temporal gyrus, posterior cingulate gyrus, putamen

cerebral amyloid angiopathy, mild cognitive impairment, Parkinson's disease

multiplexed sample: Homo sapiens (female, 86 years) putamen tissue associated with Parkinson's disease; Homo sapiens (female, 70 years) middle temporal gyrus tissue associated with Parkinson's disease; ... and 8 more samples