IGVFFI8190LVYH

preview

validated

This object is in preview status. Metadata is subject to change until this object is released.

File Set

IGVFDS3515HEZA(single-nucleus ATAC-seq (10x multiome))

Summary

I1 reads from sequencing run 1

File Format

fastq

Content Type

reads

Aliases

igvf:corces_sequenceFile_ATAC_X008_G1_P005_L001_I1

md5sum

c9e6a4eb878004f0aebd3d4d46145ee4

Content MD5sum

35c89c7095b63694970aa6d770798d80

File Size

2.4 GB

Submitted File Name

Multiome_ATAC_PD_03-25_SN_X008_L001_B1_T1_P005_S9_L001_I1_001.fastq.gz

Checkfiles Version

v20

Attribution

Ryan Corces, Gladstone Institute UCSF

(

HG012076 — Ansuman Satpathy

)

Sequencing Details

Sequencing Platform

Illumina NovaSeq 6000

Sequencing Run

Flowcell ID

H5THNDSX5

Lane

Sequencing Kit

NovaSeq 6000 S4 Reagent Kit v1.5

Illumina Read Type

Average Read Length

Read Count

324093662

Samples

1 item

Accession

Type

Sample Terms

Disease Terms

Summary

IGVFSM5610ZMIM

Tissue

substantia nigra

Parkinson's disease

Homo sapiens (male, 78 years) substantia nigra tissue associated with Parkinson's disease