Home
Home
Search (⌘K or ⌃K)
Data
Methodology
Data Model
About
Help
Sign In
INDEXED
Home
/
SequenceFile
/
IGVFFI8183FBIU
IGVFFI8183FBIU
preview
validated
Json view
This object is in preview status. Metadata is subject to change until this object is released.
File Set
IGVFDS5558ZQDQ
(cell hashing barcode sequencing for scRNA-seq)
Summary
R2 reads from sequencing run 2
File Format
fastq
Content Type
reads
Aliases
harinder-singh:multiplexed_perturbation_scRNAseq_20231117_FBHTO_NGS_LAF6401A22_L002_R2
md5sum
c7e947b0f0a5741f7ad81e511356c29e
Content MD5sum
479e90db90a1d25a6641b08ee8134ed2
File Size
2.0 GB
Submitted File Name
/ix/djishnu/Common_Folder/Pease_Data/20231110_PerturbSeq/2_111723_Hsingh_5Pv2_FBHTO_LAF6401A22_S20_L002_R2_001.fastq.gz
Checkfiles Version
v17
Attribution
Harinder Singh, University of Pittsburgh
(
HG012041
—
Harinder Singh
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
2
Lane
2
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
R2
Average Read Length
90
Read Count
50130617
Files Derived From This File
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI3750AJCL
h5ad
sparse gene count matrix
cell by gene expression in sparse gene count matrix
Harinder Singh, University of Pittsburgh
835 MB
validated