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INDEXED
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SequenceFile
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IGVFFI8130CJWK
IGVFFI8130CJWK
released
validated
Json view
File Set
IGVFDS6783BLZB
(single-cell ATAC-seq (SHARE-seq))
Summary
R2 reads from sequencing run 8344
File Format
fastq
Content Type
reads
Aliases
buenrostro-bernstein:SS-LS_8344_R2
md5sum
c685482b145e0e78e20c552bb83c6b75
Content MD5sum
2afa68bdb422d2d156efd4051378b7f2
File Size
3.2 GB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-2230_L8_SS-PKR-533_SS-V1-RIGHT-HALF_R2.fastq.gz
Checkfiles Version
v17
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq X
Sequencing Run
8344
Flowcell ID
22V3MJLT3
Sequencing Kit
NovaSeq X Series 10B Reagent Kit
Illumina Read Type
R2
Average Read Length
199
Read Count
57996840
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM4295RKOR
Tissue
left cerebral cortex
Mus musculus C57BL/6J (male) left cerebral cortex tissue (cellular sub pool: SS-PKR 533)
Associated seqspec Files
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI8107PXNT
yaml
seqspec
seqspec of IGVFFI0248YHIB, IGVFFI8130CJWK
Jason Buenrostro, Broad
1.2 KB
validated